ParentOverviewReleased: PMN 16 (July 2024) Taxonomic Range: Physcomitrium patensProtein Sequence Source: Phytozome v12: Ppatens_318_v3.3.protein_primaryTranscriptOnly.fa Enzyme Functional Annotation Method: E2P2v5.0 Enzyme Evidence: Almost exclusively large-scale computational predictions of enzyme function not subject to curator review Small number of manually curated enzymes Pathway Prediction Program: Pathway Tools 28.0SAVI pathway validation lists: MCP 2.0AIPP 7.0CAPP 7.0CVP 7.0NPP 10.0UPP 10.0 Pathway Evidence: Primarily computational prediction of pathways followed by SAVI refinement and curator review Additional pathways imported from MetaCyc based on experimental evidence or curator inference Link to PGDB: MossCyc Content StatisticsNumber of Pathways: 430Number of Reactions: 3127Number of Compounds: 2483Number of Enzymes: 18964Number of Citations: 3903
