PigeonpeaCyc 2.0.0

Parent

Overview

Released:

PMN 16 (July 2024)

Taxonomic Range:

Protein Sequence Source:

Legume Information System: cajca.ICPL87119.gnm1.ann1.Y27M.protein_main.faa

Enzyme Functional Annotation Method:

Enzyme Evidence:

Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
Small number of manually curated enzymes

Pathway Prediction Program:

Pathway Tools 28.0

SAVI pathway validation lists:

MCP 2.0
AIPP 7.0
CAPP 7.0
CVP 7.0
NPP 10.0
UPP 10.0

Pathway Evidence:

Substantial manual curation of pathways
Some computational prediction of pathways followed by curator review
Additional pathways imported from MetaCyc based on curator inference

Link to PGDB:

Content Statistics

Number of Pathways:

518

Number of Reactions:

3393

Number of Compounds:

2694

Number of Enzymes:

7445

Number of Citations:

4476