SweetcherryCyc 1.0.2

Parent

Overview

Released:

PMN 15.5 (December 2022)

Taxonomic Range:

Prunis avium

Protein Sequence Source:

PAV_r1.0.proteins.fasta

Enzyme Functional Annotation Method:

Enzyme Evidence:

Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
Small number of manually curated enzymes

Pathway Prediction Program:

Pathway Tools 26.0

SAVI pathway validation lists:

MCP 2.0
AIPP 6.0
CAPP 6.0
CVP 6.0
NPP 9.0
UPP 9.0

Pathway Evidence:

Substantial manual curation of pathways
Some computational prediction of pathways followed by curator review
Additional pathways imported from MetaCyc based on curator inference

Link to PGDB:

Content Statistics

Number of Pathways:

501

Number of Reactions:

3130

Number of Compounds:

2341

Number of Enzymes:

6757

Number of Citations:

3985