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WildsugarcaneCyc 1.0

Taxonomic Range:
Protein Sequence Source:

The Ming Laboratory, University of Illinois: Sspon.v20190103.protein.fasta

Enzyme Functional Annotation Method:
Enzyme Evidence:
  • Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
  • Small number of manually curated enzymes
Pathway Prediction Program
Pathway Tools 23.0
SAVI pathway validation list:
Pathway Evidence:
  • Substantial manual curation of pathways
  • Some computational prediction of pathways followed by curator review
  • Additional pathways imported from MetaCyc based on curator inference

Link to PGDB: [acf_link_combine field1=”ptools_server_url_i” field2=”ptools_db_id” text_field=”db_name” text_class=”db-name” sep=”/organism-summary?object=”]

Number of Pathways:
500
Number of Reactions:
3216
Number of Compounds:
2424
Number of Enzymes:
19681
Number of Citations:
3934