Taxonomic Range:
Protein Sequence Source:
Phytozome v10 (nuclear): Athaliana_167_peptide.fa and TAIR (organellar): various genome releases including TAIR10_pep_20110103_representative_gene_model
Enzyme Functional Annotation Method:
Primarily E2P2 v3.0
Enzyme Evidence:
- Substantial manual curation of enzymes
- In addition, large-scale computational predictions of enzyme function not subject to curator review
Pathway Prediction Program
Pathway Tools v18.5 (primarily)
Pathway Evidence:
- Substantial manual curation of pathways
- Some computational prediction of pathways followed by curator review
- Additional pathways imported from MetaCyc based on curator inference
Link to PGDB: AraCyc
Number of Pathways:
619
Number of Reactions:
3482
Number of Compounds:
2802
Number of Enzymes:
5472
Number of Citations:
5485