McommodaCyc 1.0

McommodaCyc 1.0

Protein Sequence Source:
Enzyme Functional Annotation Method:
Enzyme Evidence:
  • Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
  • Small number of manually curated enzymes
Pathway Prediction Program
Pathway Tools v20.5 (primarily)
SAVI pathway validation list:
Pathway Evidence:
  • Substantial manual curation of pathways
  • Some computational prediction of pathways followed by curator review
  • Additional pathways imported from MetaCyc based on curator inference

Link to PGDB: McommodaCyc

Number of Pathways:
308
Number of Reactions:
1976
Number of Compounds:
1448
Number of Enzymes:
1813
Number of Citations:
2763