OryzaCyc 1.0

Parent

Overview

Released:

Taxonomic Range:

Oryza sativa japonica group

Protein Sequence Source:

Phytozome 9.0 Osativa_193_peptide.fa

Enzyme Functional Annotation Method:

Enzyme Evidence:

Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
Small number of manually curated enzymes

Pathway Prediction Program:

Pathway Tools 16.5

SAVI pathway validation lists:

Pathway Evidence:

Primarily computational prediction of pathways followed by SAVI refinement and curator review
Additional pathways imported from MetaCyc based on experimental evidence or curator inference

Link to PGDB:

Content Statistics

Pathways:

482

Enzymes:

15677

Reactions:

3000

Compounds:

2226

Citations:

2987