SpirodelaCyc 2.0

Parent

Overview

Released:

Taxonomic Range:

Spirodela polyrhiza

Protein Sequence Source:

Phytozome v10 (early release): Spolyrhiza_290_v2.protein.fa

Enzyme Functional Annotation Method:

Enzyme Evidence:

Almost exclusively large-scale computational predictions of enzyme function not subject to curator review
Small number of manually curated enzymes

Pathway Prediction Program:

Pathway Tools v18.5

SAVI pathway validation lists:

Pathway Evidence:

Primarily computational prediction of pathways followed by SAVI refinement and curator review
Additional pathways imported from MetaCyc based on experimental evidence or curator inference

Link to PGDB:

Content Statistics

Pathways:

496

Enzymes:

3638

Reactions:

2722

Compounds:

2045

Citations:

3402